In Press
Garnas J, Lombardero FJ, Ayres MP. Population Dynamics. In: Allison J, Paine TD Forest Entomology. Springer ; In Press.
Fitza KN, Garnas JR, Slippers B. Fitness consequences of lineage interbreeding in the nematode Deladenus siricidicola, biological control agent of the European woodwasp, Sirex noctilio. Biological Control. 2022;169 :104875.Abstract
Deladenus siricidicola is a principal biological control agent used to suppress populations of the globally invasive pine pest, the woodwasp Sirex noctilio. Previous studies have reported low genetic diversity in D. siricidicola populations in biological control programs in the Southern Hemisphere and identified two additional, distinct lineages in North America and Spain. In this study, we tested the ability of these three lineages to interbreed and produce viable offspring. We used microsatellite markers to confirm admixture in offspring. Secondly, we compared growth rates among parental and admixed replicates on four isolates of the Amylostereum areolatum fungus on which nematodes typically feed in their asexual, non-parasitic phase. We show that all the lineages were capable of interbreeding and that admixture was asymmetric (i.e., skewed towards one of the parents). The offspring from one of the crosses showed significant variation in growth rate on different isolates of A. areolatum, compared to the parental isolates, but specifically on the slowest growing fungal isolate. Our results pave the way for the strategic introduction of genetic diversity into biological control programs and also inform expectations of accidental introductions of D. siricidicola into new regions. 
Dittrich-Schroder G, Garnas JR, Arriagada-Cares D, Ahumada R, Hurley BP, Lawson SA, Slippers B. Global diversity and introduction history of Glycaspis brimblecombei reflects a history of bridgeheads and distinct invasions. Frontiers in Forests and Global Change [Internet]. 2021;4. Publisher's Version dittrich-schroder_2021_diversity_and_introduction_history_of_glycaspis_br.pdf
Krivak-Tetley FE, Lantschner MV, Lombardero M, Garnas JR, Hurley BP, Villacide JM, Slippers B, Corley JC, Liebhold AM, Ayres MP. Aggressive tree killer or natural thinning agent? Assessing the impacts of a globally important forest insect. Forest Ecology and Management [Internet]. 2021. Publisher's VersionAbstract

Invasive insects and pathogens are prominent tree mortality agents in forests around the world, and the magnitude of their impacts is increasing. Comparative studies across multiple populations can be helpful for the development of new insights and innovative management strategies. We used the Sirex woodwasp, Sirex noctilio Fabricius, as a model system to compare invasion impacts across a range of ecological contexts around the globe: native woodwasps colonizing native trees, invasive woodwasps in non-native plantation trees, and invasive woodwasps attacking native trees. Across 133 stands of eight pine species on four continents, tree mortality associated with S. noctilio attack was positively correlated with stand basal area and stand density, and was mostly confined to smaller, suppressed trees. Larger average tree size and greater distances between trees were linked to lower levels of tree mortality. To more deeply assess the impacts of tree loss due to this pest, we examined mortality in vigorous trees, defined as those with a stem diameter greater than or equal to 90% of the mean diameter for trees in the stand. Sirex noctilio- related mortality in vigorous trees was rare, with one exception where Pinus contorta stands in Argentina lost as many as 300 vigorous trees ha1. Pine species varied dramatically in their susceptibility to S. noctilio: for example, these losses in P. contorta were in stark contrast to very low mortality in P. ponderosa, the other pine species grown in Argentina. Surprisingly, location did not alter patterns in the influence of stand basal area on tree susceptibility for individual species. Most notably, Pinus radiata had the same relationship between basal area and tree mortality when grown in Spain (where S. noctilio is native and not considered a meaningful forest pest) and South Africa (where S. noctilio is a problematic invasive). Our findings suggest that the availability of optimal pine hosts is a key driver of S. noctilio-related tree mortality across continents and management regimes. Important variables that influence host availability include species- specific susceptibility and environmental and management-related factors that promote or limit the number of stressed trees present both within stands and across the regional forest or plantation landscape.  

Morrison E, Kasson M, Heath J, Garnas JR. Pathogen and endophyte assemblages co-vary with beech bark disease progression, tree decline, and regional climate. Frontiers in Forests and Global Change [Internet]. 2021. Publisher's VersionAbstract
Plant-pathogen interactions are often considered in a pairwise manner with minimal consideration of the impacts of the broader endophytic community on disease progression and/or outcomes for disease agents and hosts. Community interactions may be especially relevant in the context of disease complexes (i.e, interacting or functionally redundant causal agents) and decline diseases (where saprobes and weak pathogens synergize the effects of primary infections and hasten host mortality). Here we describe the bark endophyte communities associated with a widespread decline disease of American beech, beech bark disease (BBD), caused by an invasive scale insect (Cryptococcus fagisuga) and two fungal pathogens, Neonectria faginata and N. ditissima. We show that the two primary fungal disease agents co-occur more broadly than previously understood (35.5% of infected trees), including within the same 1-cm diameter phloem samples. The two species appear to have contrasting associations with climate and stages of tree decline, wherein N. faginata was associated with warmer and N. ditissima with cooler temperatures. Neonectria ditissima showed a positive association with tree crown dieback – no such association was observed for N. faginata. Further, we identify fungal endophytes that may modulate disease progression as entomopathogens, mycoparasites, saprotrophs and/or additional pathogens, including Clonostachys rosea and Fusarium babinda. These fungi may alter the trajectory of disease via feedbacks with the primary disease agents or by altering symptom expression or rates of tree decline across the range of BBD.
Garnas JR, Vann K, Hurley BP. Biotic and abiotic effects on density, body size, sex ratio, and survival in immature stages of the European woodwasp, Sirex noctilio. Ecology and Evolution [Internet]. 2020. Publisher's VersionAbstract
Resource quality can have direct or indirect effects on female oviposition choice, offspring growth and survival, and ultimately on body size and sex ratio. We examined these patterns in Sirex noctilio Fabricus, the globally invasive European pine woodwasp, in South African Pinus patula plantations. We studied how tree position as well as natural variation in biotic and abiotic factors influenced sex-specific density, larval size, tunnel length, male proportion, and survival across development. Twenty infested trees divided into top, middle, and bottom sections were sampled at three time points during larval development. We measured moisture content, bluestain fungal colonization, and co-occurring insect density and counted, measured, and sexed all immature wasps. A subset of larval tunnels was measured to assess tunnel length and resource use efficiency (tunnel length as a function of immature wasp size). Wasp density increased from the bottoms to the tops of trees for both males and females. However, the largest individuals and the longest tunnels were found in bottom sections. Male bias was strong (~10:1) and likewise differed among sections, with the highest proportion in the middle and top sections. Sex ratios became more strongly male biased due to high female mortality, especially in top and middle sections. Biotic and abiotic factors such as colonization by Diplodia sapinea, weevil (Pissodes sp.) density, and wood moisture explained modest residual variation in our primary mixed effects models (0%–22%). These findings contribute to a more comprehensive understanding of sex-specific resource quality for S. noctilio and of how variation in key biotic and abiotic factors can influence body size, sex ratio, and survival in this economically important woodwasp.
Stauder CM, Garnas JR, Morrison EW, Salgado-Salazar C, Kasson MT. Characterization of mating type genes in heterothallic Neonectria species with emphasis on N. coccinea, N. ditissima, and N. faginata. Mycologia [Internet]. 2020;112 (5) :880-894. 10.1080/00275514.2020.1797371Abstract
Neonectria ditissima and N. faginata are canker pathogens involved in an insect-fungus disease complex of American beech (Fagus grandifolia) commonly known as beech bark disease (BBD). In Europe, both N. ditissima and N. coccinea are involved in BBD on European beech (Fagus sylvatica). Field observations across the range of BBD indicate that new infections occur primarily via ascospores. Both heterothallic (self-sterile) and homothallic (self-fertile) mating strategies have been reported for Neonectria fungi. As such, investigations into mating strategy are important for understanding both the disease cycle and population genetics of Neonectria. This is particularly important in the U.S. given that over time N. faginata dominates the BBD pathosystem despite high densities of non-beech hosts for N. ditissima. This study utilized whole-genome sequences of BBD-associated Neonectria spp. along with other publicly available Neonectria and Corinectria genomes and in vitro mating assays to characterize mating type (MAT) loci and confirm thallism for select members of Neonectria and Corinectria. MAT gene-specific primer pairs were developed to efficiently characterize the mating types of additional single ascospore strains of N. ditissima, N. faginata, and N. coccinea and several other related species lacking genomic data. In vitro mating assays were used in combination with molecular results to confirm thallism. These assays also comfirmed the sexual compatibility among N. ditissima strains from different plant hosts. Maximum likelihood phylogenetic analysis of both MAT1-1-1 and MAT1-2-1 sequences recovered trees with similar topology to previously published phylogenies of Neonectria and Corinectria. The results of this study indicate that all Neonectria and Corinectria tested are heterothallic based on our limited sampling and, as such, thallism cannot help explain the inevitable dominance of N. faginata in the BBD pathosystem.
Mutitu EK, Hoareau TB, Hurley BP, Garnas JR, Wingfield MJ, Slippers B. Reconstructing early routes of invasion of the bronze bug Thaumastocoris peregrinus (Hemiptera: Thaumastocoridae): cities as bridgeheads for global pest invasions. Biological Invasions. 2020.Abstract
Insect pest invasions pose a major threat to agriculture, forestry and many natural ecosystems. Thaumastocoris peregrinus is an invasive sap-sucking pest of significant economic importance to Eucalyptus forestry that has recently invaded several countries worldwide. In this study we identify the origin and retrace the invasion history of T. peregrinus. We analysed samples from six locations in Africa, South America and Australia using microsatellites markers and a combination of clustering methods and scenario testing using Approximate Bayesian Clustering. We detected clear genetic substructure differentiating African and South American samples, with representatives of both present in Australia. The Australian population from New South Wales showed substantially higher genetic diversity than the Queensland source, which could indicate that this region could be part of the core range and evolutionary origin of the species. Africa and South America were colonised by independent introductions that occurred more or less concurrently. The study illustrates the impact of the bridgehead effect on global invasions following an outbreak or ‘invasion’ within a city in the native range of the insect.
Wondafrash M, Slippers B, Hurley BP, Garnas JR. Local antagonism and resource partitioning among two invasive pine plantation pest. Agricultural and Forest Entomology. 2019;21 :276-285.
Fitza KNE, Garnas JR, Lombardero MJ, Ayres MP, Krivak-Tetley FE, Ahumada R, Hurley BP, Wingfield MJ, Slippers B. The global diversity of Deladenus siricidicola in native and non-native populations. Biological Control. 2019;132 :57-65.
Queffelec J, Wooding A, Greeff J, Garnas JR, Hurley BP, Wingfield MJ, Slippers B. Potential mechanisms that influence sex ratio variation in the invasive Hymenopteran Sirex noctilio in South Africa. Ecology and Evolution. 2019;14 :7966-7973.
Mutitu EK, Hoareau TB, Hurley BP, Garnas JR, Wingfield MJ, Slippers B. Reconstructing routes of invasion of the Bronze Bug Thaumastocoris peregrinus ﴾Hemiptera: Thaumastocoridae﴿. Biological Invasions [Internet]. 2019;22 :2325–2335. Publisher's Version
Burgess T, McDougall K, Scott P, Hardy G, Garnas J. Predictors of Phytophthora diversity and community composition in natural areas across diverse Australian ecoregions. Ecography [Internet]. 2018;42 (1) :1-14. Publisher's VersionAbstract
Comprehensive understanding of the patterns and drivers of microbial diversity at a landscape scale is in its infancy, despite the recent ease by which soil communities can be characterized using massively parallel amplicon sequencing. Here we report on a comprehensive analysis of the drivers of diversity distribution and composition of the ecologically and economically important Phytophthora genus from 414 soil samples collected across Australia. We assessed 22 environmental and seven categorical variables as potential predictors of Phytophthora species richness, αandβ diversity, including both phylogenetically and non-phylogenically explicit methods. In addition, we classified each species as putatively native or introduced and examined the distribution with respect to putative origin. The two most widespread species, P. multivora and P. cinamomi, are introduced, though five of the ten most widely distributed species are putatively native. Introduced taxa comprised over 54% of Australia's Phytophthora diversity and these species are known pathogens of annual and perennial crop habitats as well as urban landscapes and forestry. Patterns of composition were most strongly predicted by bioregion (R2=0.29) and ecoregion (R2=0.26) identity; mean precipitation of warmest quarter, mean temperature of the wettest quarter and latitude were also highly significant and described approximately 21%, 14% and 13% of variation in NMDS composition, respectively. We also found statistically significant evidence for phylogenetic over-dispersion with respect to key climate variables.This study provides a strong baseline for understanding biogeographical patterns in this important genus as well the impact of key plant pathogens and invasive Phytophthora species in natural ecosystems.
Burgess TI, Tan YP, Garnas J, Edwards J, Scarlett KA, Shuttleworth LA, Daniel R, Dann EK, Parkinson LE, Dinh Q, et al. Current status of the Botryosphaeriaceae in Australia . Australasian Plant Pathology [Internet]. 2018. Publisher's VersionAbstract

The Botryosphaeriales, and in particular the Botryosphaeriaceae, are a well-studied group of fungi best known for the canker diseases they cause on woody hosts especially in stressed or damaged trees. Australian Plant Pathology herbaria contain many records for this group, but due to considerable taxonomic changes over the past decade, many of the species names have since been reclassified. In this article we used all published records with available sequence data of the Botryosphaeriaceae in Australia to examine the distribution and host range of these taxa. There are 24 genera encompassing 222 species in the Botryosphaeriaceae; 9 genera and 62 species have been recorded in Australia. Some genera such as Neoscytalidium are only found in warm, humid climates while Dothiorella species are more common in temperate climates. There were species, such as Lasiodiplodia theobromae, Neofusicoccum parvum and Botryosphaeria dothidea, which had a wide host range with many records. However, there were also several species found only in one location on a single host. While systematic data collection is still required, the information presented here provides a baseline of species present in Australia and will underpin future studies into this group of important pathogens.

Asbjornsen H, Campbell JL, D'Amato AW, Garnas J, Gunn JS, Iverson LR, Ontl TA, Peters MW, Shannon PD. Forest management options for addressing drought in the Midwest and Northeast U.S. Service USF. Forests and Drought. 2018.
Garnas J. Rapid evolution of insects to global environmental change: conceptual issues and empirical gaps. Current Opinions in Insect Science [Internet]. 2018;29 :93–101. LinkAbstract

Understanding how insects will respond both ecologically and evolutionarily to complex and interacting factors linked to global change is an important challenge that underpins our ability to produce better predictive models and to anticipate and manage ecosystem-scale disruption in the Anthropocene. Insects have the capacity to rapidly adapt to changing conditions via a variety of mechanisms which include both phenotypically plastic and evolutionary responses that interact in important ways. This short review comments on the current state of knowledge surrounding rapid evolution in insects and highlights conceptual and empirical gaps. Emphasis is placed on the need to consider direct and indirect community-level feedbacks via both ecological and evolutionary mechanisms when examining the consequences of global change, with particular focus on insects and their facultative and obligate symbionts.

Wondafrash M, Slippers B, Garnas J, Hurley B. Parasitoid assemblage associated with a North American pine weevil in South Africa . Agricultural and Forest Entomology. 2017.Abstract

 1 The weevil Pissodessp. was first reported as an introduced pest on exotic Pinusspp.
was described fromSouth Africaas a parasitoidof thisweevil.
2 We estimated the frequency and distribution of the association between P. pix and
Pissodessp., as well as the occurrence of possible other natural enemies. Parasitoids
were reared from Pissodes-infested Pinus radiata D. Don and Pinus patula Schiede
ex Schltdl. & Cham logs collected frommajor Pinus-growing regions.
3 The identity of parasitoids was confirmed using morphological and molecular tech-
niques. Parasitismwas confirmed by analyzing gut content sequences of parasitoids.
4 Pycnetron pix was found parasitizing Pissodes sp. throughout major Pinus-growing
provinces of the country. Another native parasitoid, Cratocnema sp., is reported for
the first time as a parasitoid of Pissodes sp. Rhopalicus tutela (Walker), a known
parasitoid of Pissodes spp. in their native range, was also detected and confirmed to
be ofEuropean origin.
5 Althoughcharacterizedbyanerraticdistributionandalowparasitismrate,anaccruing
suite of natural enemies was documented, suggesting that there is potential for
augmentative biological control of Pissodessp. inSouth Africa.

Burgess TI, White D, McDougall KM, Garnas J, Dunstan WA, Català S, Carnegie AJ, Worboys S, Cahill D, Vettraino A-M, et al. Distribution and diversity of Phytophthora across Australia . Pacific Conservation Biology [Internet]. 2017;23 :1-13. doi: 10.1071/PC16032Abstract

The introduction and subsequent impact of Phytophthora cinnamomi within native vegetation is one of the major conservation issues for biodiversity in Australia. Recently, many new Phytophthora species have been described from Australia’s native ecosystems; however, their distribution, origin, and potential impact remain unknown. Historical bias in Phytophthora detection has been towards sites showing symptoms of disease, and traditional isolation methods show variable effectiveness of detecting different Phytophthora species. However, we now have at our disposal new techniques based on the sampling of environmental DNA and metabarcoding through the use of high-throughput sequencing. Here, we report on the diversity and distribution of Phytophthora in Australia using metabarcoding of 640 soil samples and we compare the diversity detected using this technique with that available in curated databases. Phytophthora was detected in 65% of sites, and phylogenetic analysis revealed 68 distinct Phytophthora phylotypes. Of these, 21 were identified as potentially unique taxa and 25 were new detections in natural areas and/or new introductions to Australia. There are 66 Phytophthora taxa listed in Australian databases, 43 of which were also detected in this metabarcoding study. This study revealed high Phytophthora richness within native vegetation and the additional records provide a valuable baseline resource for future studies. Many of the Phytophthora species now uncovered in Australia’s native ecosystems are newly described and until more is known we need to be cautious with regard to the spread and conservation management of these new species in Australia’s unique ecosystems.

Olivier-Espejel S, Hurley BP, Garnas J. Assessment of beetle diversity, community composition and potential threats to forestry using kairomone-baited traps. Bulletin of Entomological Research [Internet]. 2017;107 :106-117. doi: 10.1017/S0007485316000699Abstract

Traps designed to capture insects during normal movement/dispersal, or via attraction to non-specific (plant) volatile lures, yield by-catch that carries valuable information about patterns of community diversity and composition. In order to identify potential native/introduced pests and detect predictors of colonization of non-native pines, we examined beetle assemblages captured in intercept panel traps baited with kairomone lures used during a national monitoring of the woodwasp, Sirex noctilio, in Southern Africa. We identified 50 families and 436 morphospecies of beetles from nine sites sampled in both 2008 and 2009 and six areas in 2007 (trap catch pooled by region) across a latitudinal and elevational gradient. The most diverse groups were mainly those strongly associated with trees, known to include damaging pests. While native species dominated the samples in terms of richness, the dominant species was the introduced bark beetle Orthotomicus erosus (Curculionidae: Scolytinae) (22 +/- 34 individuals/site). Four Scolytinae species without previous records in South Africa, namely Coccotrypes niger, Hypocryphalus robustus (formerly Hypocryphalus mangiferae), Hypothenemus birmanus and Xyleborus perforans, were captured in low abundances. Communities showed temporal stability within sites and strong biogeographic patterns across the landscape. The strongest single predictors of community composition were potential evaporation, latitude and maximum relative humidity, while the strongest multifactor model contained elevation, potential evaporation and maximum relative humidity. Temperature, land use variables and distance to natural areas did not significantly correlate with community composition. Non-phytophagous beetles were also captured and were highly diverse (32 families) perhaps representing important beneficial insects.

Mbenoun M, Garnas JR, Wingfield M, Boyogueno A, Roux J. Metacommunity analyses of Ceratocystidaceae fungi across heterogeneous African savanna landscapes . Fungal Ecology [Internet]. 2017;28 :76-85. Publisher's VersionAbstract

Metacommunity theory offers a powerful framework to investigating the structure and dynamics of ecological communities. We use Ceratocystidaceae fungi as an empirical system to explore the potential of metacommunity principles to explain the incidence of putative fungal tree pathogens in natural ecosystems. The diversity of Ceratocystidaceae fungi was evaluated on elephant-damaged trees across the Kruger National Park of South Africa. Multivariate statistics were then used to assess the influence of landscapes, tree hosts and nitidulid beetle associates as well as isolation by distance on fungal community structure. Eight fungal and six beetle species were recovered on trees representing several plant genera. The distribution of Ceratocystidaceae fungi was highly heterogeneous across landscapes. Both tree host and nitidulid vector emerged as key factors contributing to this heterogeneity, while isolation by distance showed little influence. Our results are consistent with a model of metacommunity dynamics combining species sorting and patch dynamics processes.